Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RHBDD3Q9Y3P4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 KRT18P5-201ENST00000436075 1291 ntBASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 AC243732.1-201ENST00000612648 864 ntBASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 MYCNOS-205ENST00000641950 531 ntBASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RHBDD3Q9Y3P4 TCF3P1-201ENST00000423021 1937 ntBASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 AC091799.1-201ENST00000422823 811 ntBASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RHBDD3Q9Y3P4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
RHBDD3Q9Y3P4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.64■□□□□ 0.42
RHBDD3Q9Y3P4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RHBDD3Q9Y3P4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RHBDD3Q9Y3P4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.63■□□□□ 0.41
RHBDD3Q9Y3P4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms