Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC073648.6-201ENST00000641589 218 ntBASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.75■■□□□ 1.07
UBQLN1Q9UMX0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
UBQLN1Q9UMX0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 POM121L13P-201ENST00000422362 380 ntBASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
UBQLN1Q9UMX0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN1Q9UMX0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 AC120498.8-201ENST00000614275 531 ntBASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
UBQLN1Q9UMX0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
UBQLN1Q9UMX0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.7■■□□□ 1.07
UBQLN1Q9UMX0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.7■■□□□ 1.06
UBQLN1Q9UMX0 PTBP1P-201ENST00000554374 1601 ntBASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 AC069544.1-201ENST00000609399 999 ntBASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.69■■□□□ 1.06
UBQLN1Q9UMX0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms