Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 AC099778.1-201ENST00000568593 1911 ntBASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 AC120498.9-201ENST00000339021 3867 ntBASIC20.28■□□□□ 0.84
CPSF2Q9P2I0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.27■□□□□ 0.84
CPSF2Q9P2I0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF2Q9P2I0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF2Q9P2I0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF2Q9P2I0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF2Q9P2I0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CPSF2Q9P2I0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 RARRES2P11-201ENST00000635158 484 ntBASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.26■□□□□ 0.83
CPSF2Q9P2I0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 AC027612.3-201ENST00000413684 1047 ntBASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 AC138907.5-202ENST00000569484 235 ntBASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CPSF2Q9P2I0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
CPSF2Q9P2I0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms