Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL023875.1-201ENST00000640777 796 ntBASIC22.99■■□□□ 1.27
COL20A1Q9P218 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.99■■□□□ 1.27
COL20A1Q9P218 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
COL20A1Q9P218 AC124283.5-201ENST00000624661 1809 ntBASIC22.98■■□□□ 1.27
COL20A1Q9P218 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
COL20A1Q9P218 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL20A1Q9P218 AC006128.1-201ENST00000624704 1661 ntBASIC22.98■■□□□ 1.27
COL20A1Q9P218 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 AC023632.3-201ENST00000521633 145 ntBASIC22.98■■□□□ 1.27
COL20A1Q9P218 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL20A1Q9P218 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
COL20A1Q9P218 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
COL20A1Q9P218 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 AC124016.1-201ENST00000609552 612 ntBASIC22.97■■□□□ 1.27
COL20A1Q9P218 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.97■■□□□ 1.27
COL20A1Q9P218 AC007375.3-201ENST00000600936 2314 ntBASIC22.97■■□□□ 1.27
COL20A1Q9P218 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
COL20A1Q9P218 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
COL20A1Q9P218 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.96■■□□□ 1.27
COL20A1Q9P218 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
COL20A1Q9P218 Z99916.2-201ENST00000604037 246 ntBASIC22.95■■□□□ 1.26
COL20A1Q9P218 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
COL20A1Q9P218 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
COL20A1Q9P218 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
COL20A1Q9P218 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL20A1Q9P218 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
COL20A1Q9P218 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.93■■□□□ 1.26
COL20A1Q9P218 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
COL20A1Q9P218 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms