Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NLGN3Q9NZ94 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 RPS2P55-201ENST00000397318 883 ntBASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 AC107956.1-201ENST00000494359 873 ntBASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NLGN3Q9NZ94 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AL135905.2-201ENST00000584934 1404 ntBASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AP001412.1-201ENST00000608405 714 ntBASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AC110285.5-201ENST00000611501 352 ntBASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NLGN3Q9NZ94 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NLGN3Q9NZ94 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 AL137060.1-201ENST00000618151 2648 ntBASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.78■□□□□ 0.76
NLGN3Q9NZ94 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms