Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PRDM9Q9NQV7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 AL162377.1-201ENST00000618844 1793 ntBASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.1■□□□□ 0.65
PRDM9Q9NQV7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.09■□□□□ 0.65
PRDM9Q9NQV7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRDM9Q9NQV7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 AC083880.1-201ENST00000608266 535 ntBASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.08■□□□□ 0.64
PRDM9Q9NQV7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 C2orf69P4-201ENST00000565394 541 ntBASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PRDM9Q9NQV7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRDM9Q9NQV7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms