Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A20Q9NP91 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 AC020907.5-201ENST00000624372 1936 ntBASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 RNA5SP413-201ENST00000516373 109 ntBASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 AL157384.1-201ENST00000445995 2473 ntBASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A20Q9NP91 DPP3P2-201ENST00000416030 1696 ntBASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A20Q9NP91 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC6A20Q9NP91 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A20Q9NP91 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A20Q9NP91 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
SLC6A20Q9NP91 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC6A20Q9NP91 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 FAM201B-201ENST00000458407 597 ntBASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 PTBP1P-201ENST00000554374 1601 ntBASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A20Q9NP91 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 AC092667.1-201ENST00000434301 2586 ntBASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A20Q9NP91 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms