Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC020907.5-201ENST00000624372 1936 ntBASIC23.85■■□□□ 1.41
RNF41Q9H4P4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 CD99P1-205ENST00000527459 561 ntBASIC23.85■■□□□ 1.41
RNF41Q9H4P4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 DPP3P2-201ENST00000416030 1696 ntBASIC23.85■■□□□ 1.41
RNF41Q9H4P4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF41Q9H4P4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 FEM1AP1-201ENST00000431297 1995 ntBASIC23.84■■□□□ 1.41
RNF41Q9H4P4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 PNMA6B-201ENST00000538162 1200 ntBASIC23.84■■□□□ 1.41
RNF41Q9H4P4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF41Q9H4P4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 AP005212.1-201ENST00000581547 1997 ntBASIC23.83■■□□□ 1.41
RNF41Q9H4P4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 PTBP1P-201ENST00000554374 1601 ntBASIC23.83■■□□□ 1.41
RNF41Q9H4P4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF41Q9H4P4 AC073314.1-201ENST00000568729 2216 ntBASIC23.83■■□□□ 1.4
RNF41Q9H4P4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF41Q9H4P4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 AC005829.2-201ENST00000571422 1056 ntBASIC23.81■■□□□ 1.4
RNF41Q9H4P4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.81■■□□□ 1.4
RNF41Q9H4P4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RNF41Q9H4P4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms