Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 AC005181.1-201ENST00000604782 1256 ntBASIC25.5■■□□□ 1.67
CHMP4BQ9H444 AC080038.1-201ENST00000611274 1154 ntBASIC25.5■■□□□ 1.67
CHMP4BQ9H444 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
CHMP4BQ9H444 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 AC099778.1-201ENST00000568593 1911 ntBASIC25.48■■□□□ 1.67
CHMP4BQ9H444 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 AC133552.2-202ENST00000575694 574 ntBASIC25.48■■□□□ 1.67
CHMP4BQ9H444 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 AC092437.1-201ENST00000624794 1048 ntBASIC25.48■■□□□ 1.67
CHMP4BQ9H444 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CHMP4BQ9H444 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 AC010980.2-201ENST00000587099 1412 ntBASIC25.47■■□□□ 1.67
CHMP4BQ9H444 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 SMG8-203ENST00000578922 2178 ntBASIC25.47■■□□□ 1.67
CHMP4BQ9H444 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 AL589743.5-201ENST00000616611 1050 ntBASIC25.47■■□□□ 1.67
CHMP4BQ9H444 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CHMP4BQ9H444 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.46■■□□□ 1.67
CHMP4BQ9H444 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CHMP4BQ9H444 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 AC004911.1-201ENST00000416316 871 ntBASIC25.45■■□□□ 1.66
CHMP4BQ9H444 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 AC073111.5-205ENST00000641717 521 ntBASIC25.45■■□□□ 1.66
CHMP4BQ9H444 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 RNF165-205ENST00000588679 2904 ntBASIC25.45■■□□□ 1.66
CHMP4BQ9H444 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.45■■□□□ 1.66
CHMP4BQ9H444 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms