Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 AC120498.8-201ENST00000614275 531 ntBASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATXN3LQ9H3M9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATXN3LQ9H3M9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.22■□□□□ 0.99
ATXN3LQ9H3M9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.21■□□□□ 0.99
ATXN3LQ9H3M9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
ATXN3LQ9H3M9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ATXN3LQ9H3M9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms