Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CDH23Q9H251 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDH23Q9H251 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.66■■□□□ 1.06
CDH23Q9H251 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH23Q9H251 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CDH23Q9H251 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CDH23Q9H251 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.66■■□□□ 1.06
CDH23Q9H251 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH23Q9H251 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC21.66■■□□□ 1.06
CDH23Q9H251 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH23Q9H251 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH23Q9H251 AK4P3-201ENST00000418260 669 ntBASIC21.65■■□□□ 1.06
CDH23Q9H251 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH23Q9H251 NAPSB-206ENST00000562112 1266 ntBASIC21.65■■□□□ 1.06
CDH23Q9H251 AP000550.4-202ENST00000639755 178 ntBASIC21.65■■□□□ 1.06
CDH23Q9H251 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CDH23Q9H251 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH23Q9H251 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDH23Q9H251 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CDH23Q9H251 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDH23Q9H251 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH23Q9H251 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH23Q9H251 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH23Q9H251 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH23Q9H251 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CDH23Q9H251 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH23Q9H251 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.64■■□□□ 1.06
CDH23Q9H251 FAM87A-204ENST00000613235 858 ntBASIC21.64■■□□□ 1.06
CDH23Q9H251 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.64■■□□□ 1.06
CDH23Q9H251 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH23Q9H251 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDH23Q9H251 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH23Q9H251 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH23Q9H251 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH23Q9H251 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH23Q9H251 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.64■■□□□ 1.05
CDH23Q9H251 HCG4P8-203ENST00000443049 980 ntBASIC21.64■■□□□ 1.05
CDH23Q9H251 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH23Q9H251 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH23Q9H251 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH23Q9H251 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH23Q9H251 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH23Q9H251 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH23Q9H251 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH23Q9H251 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH23Q9H251 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH23Q9H251 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH23Q9H251 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.63■■□□□ 1.05
CDH23Q9H251 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH23Q9H251 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH23Q9H251 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CDH23Q9H251 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDH23Q9H251 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 ATP5G1P1-201ENST00000448724 379 ntBASIC21.62■■□□□ 1.05
CDH23Q9H251 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.62■■□□□ 1.05
CDH23Q9H251 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.62■■□□□ 1.05
CDH23Q9H251 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH23Q9H251 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.62■■□□□ 1.05
CDH23Q9H251 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH23Q9H251 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH23Q9H251 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.62■■□□□ 1.05
CDH23Q9H251 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH23Q9H251 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH23Q9H251 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 FAM99A-202ENST00000538190 1989 ntBASIC21.61■■□□□ 1.05
CDH23Q9H251 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH23Q9H251 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.61■■□□□ 1.05
CDH23Q9H251 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH23Q9H251 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms