Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.01■□□□□ 0.95
RNF38Q9H0F5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 MTDHP1-201ENST00000605323 784 ntBASIC21.01■□□□□ 0.95
RNF38Q9H0F5 FAM197Y4-202ENST00000622692 608 ntBASIC21.01■□□□□ 0.95
RNF38Q9H0F5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 AC005229.4-201ENST00000610085 2198 ntBASIC21.01■□□□□ 0.95
RNF38Q9H0F5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21■□□□□ 0.95
RNF38Q9H0F5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
RNF38Q9H0F5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21■□□□□ 0.95
RNF38Q9H0F5 RPS2P4-201ENST00000476944 856 ntBASIC21■□□□□ 0.95
RNF38Q9H0F5 HES2-206ENST00000489730 730 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF38Q9H0F5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21■□□□□ 0.95
RNF38Q9H0F5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF38Q9H0F5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21■□□□□ 0.95
RNF38Q9H0F5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21■□□□□ 0.95
RNF38Q9H0F5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF38Q9H0F5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 AC008550.1-201ENST00000511500 884 ntBASIC20.98■□□□□ 0.95
RNF38Q9H0F5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF38Q9H0F5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 FP700111.2-201ENST00000619190 1892 ntBASIC20.97■□□□□ 0.95
RNF38Q9H0F5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 AL596275.1-201ENST00000423464 877 ntBASIC20.97■□□□□ 0.95
RNF38Q9H0F5 AC023632.3-201ENST00000521633 145 ntBASIC20.97■□□□□ 0.95
RNF38Q9H0F5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF38Q9H0F5 AL023875.1-201ENST00000640777 796 ntBASIC20.97■□□□□ 0.95
RNF38Q9H0F5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms