Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.58■□□□□ 0.57
TRIM2Q9C040 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRIM2Q9C040 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.58■□□□□ 0.56
TRIM2Q9C040 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.58■□□□□ 0.56
TRIM2Q9C040 AL162412.1-201ENST00000567129 965 ntBASIC18.58■□□□□ 0.56
TRIM2Q9C040 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRIM2Q9C040 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TRIM2Q9C040 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRIM2Q9C040 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 AC007322.4-201ENST00000509611 723 ntBASIC18.57■□□□□ 0.56
TRIM2Q9C040 AC013268.1-206ENST00000638368 961 ntBASIC18.57■□□□□ 0.56
TRIM2Q9C040 AC112229.1-201ENST00000639295 961 ntBASIC18.57■□□□□ 0.56
TRIM2Q9C040 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM2Q9C040 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRIM2Q9C040 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM2Q9C040 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM2Q9C040 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM2Q9C040 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 AC099778.1-201ENST00000568593 1911 ntBASIC18.55■□□□□ 0.56
TRIM2Q9C040 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM2Q9C040 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 ID1-201ENST00000376105 1233 ntBASIC18.55■□□□□ 0.56
TRIM2Q9C040 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
TRIM2Q9C040 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 BID-214ENST00000617586 542 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM2Q9C040 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM2Q9C040 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM2Q9C040 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CDCA4P2-201ENST00000441182 718 ntBASIC18.54■□□□□ 0.56
TRIM2Q9C040 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 RAP2CP1-201ENST00000605103 478 ntBASIC18.54■□□□□ 0.56
TRIM2Q9C040 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 AC073111.5-205ENST00000641717 521 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms