Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.76■□□□□ 0.11
TRGV9Q99603 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.76■□□□□ 0.11
TRGV9Q99603 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRGV9Q99603 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.76■□□□□ 0.11
TRGV9Q99603 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.75■□□□□ 0.11
TRGV9Q99603 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.75■□□□□ 0.11
TRGV9Q99603 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
TRGV9Q99603 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV9Q99603 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV9Q99603 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRGV9Q99603 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.75■□□□□ 0.11
TRGV9Q99603 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRGV9Q99603 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.75■□□□□ 0.11
TRGV9Q99603 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRGV9Q99603 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV9Q99603 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRGV9Q99603 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRGV9Q99603 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV9Q99603 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.74■□□□□ 0.11
TRGV9Q99603 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 PGM5P4-201ENST00000421970 445 ntBASIC15.74■□□□□ 0.11
TRGV9Q99603 AC097381.1-201ENST00000429019 1296 ntBASIC15.74■□□□□ 0.11
TRGV9Q99603 YBX1P1-201ENST00000445822 960 ntBASIC15.74■□□□□ 0.11
TRGV9Q99603 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.74■□□□□ 0.11
TRGV9Q99603 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.74■□□□□ 0.11
TRGV9Q99603 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.74■□□□□ 0.11
TRGV9Q99603 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 BX119927.1-201ENST00000636596 1552 ntBASIC15.74■□□□□ 0.11
TRGV9Q99603 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRGV9Q99603 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV9Q99603 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV9Q99603 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.73■□□□□ 0.11
TRGV9Q99603 AC019069.1-201ENST00000610008 1333 ntBASIC15.73■□□□□ 0.11
TRGV9Q99603 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRGV9Q99603 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRGV9Q99603 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV9Q99603 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC15.73■□□□□ 0.11
TRGV9Q99603 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV9Q99603 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRGV9Q99603 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV9Q99603 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV9Q99603 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV9Q99603 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV9Q99603 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms