Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP4Q99569 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP4Q99569 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
PKP4Q99569 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP4Q99569 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PKP4Q99569 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP4Q99569 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP4Q99569 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP4Q99569 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PKP4Q99569 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
PKP4Q99569 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP4Q99569 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP4Q99569 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
PKP4Q99569 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP4Q99569 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP4Q99569 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP4Q99569 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PKP4Q99569 AL512408.1-201ENST00000569378 2000 ntBASIC19.68■□□□□ 0.74
PKP4Q99569 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP4Q99569 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP4Q99569 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 SLC29A4P1-201ENST00000398760 971 ntBASIC19.68■□□□□ 0.74
PKP4Q99569 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP4Q99569 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP4Q99569 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PKP4Q99569 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PKP4Q99569 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKP4Q99569 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP4Q99569 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PKP4Q99569 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP4Q99569 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PKP4Q99569 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP4Q99569 AL109923.1-201ENST00000618799 583 ntBASIC19.67■□□□□ 0.74
PKP4Q99569 DPP3P2-201ENST00000416030 1696 ntBASIC19.67■□□□□ 0.74
PKP4Q99569 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP4Q99569 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PKP4Q99569 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP4Q99569 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP4Q99569 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PKP4Q99569 SMG8-203ENST00000578922 2178 ntBASIC19.66■□□□□ 0.74
PKP4Q99569 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PKP4Q99569 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.66■□□□□ 0.74
PKP4Q99569 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP4Q99569 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.66■□□□□ 0.74
PKP4Q99569 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
PKP4Q99569 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 SLC25A24-204ENST00000569674 2357 ntBASIC19.65■□□□□ 0.74
PKP4Q99569 AL162377.1-201ENST00000618844 1793 ntBASIC19.65■□□□□ 0.74
PKP4Q99569 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP4Q99569 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PKP4Q99569 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP4Q99569 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP4Q99569 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 AC104771.1-201ENST00000603335 964 ntBASIC19.65■□□□□ 0.74
PKP4Q99569 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PKP4Q99569 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PKP4Q99569 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
PKP4Q99569 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PKP4Q99569 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.64■□□□□ 0.73
PKP4Q99569 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PKP4Q99569 C2orf69P4-201ENST00000565394 541 ntBASIC19.64■□□□□ 0.73
PKP4Q99569 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.64■□□□□ 0.73
PKP4Q99569 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms