Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.83■□□□□ 0.93
RPRD1AQ96P16 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPRD1AQ96P16 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 MIR4651-201ENST00000582622 73 ntBASIC20.82■□□□□ 0.92
RPRD1AQ96P16 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 AC092720.2-201ENST00000602388 1665 ntBASIC20.82■□□□□ 0.92
RPRD1AQ96P16 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPRD1AQ96P16 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 PNMA6B-201ENST00000538162 1200 ntBASIC20.81■□□□□ 0.92
RPRD1AQ96P16 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPRD1AQ96P16 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPRD1AQ96P16 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 UNC93B5-201ENST00000530315 699 ntBASIC20.79■□□□□ 0.92
RPRD1AQ96P16 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPRD1AQ96P16 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPRD1AQ96P16 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms