Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 RNF152P1-201ENST00000397754 604 ntBASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 FAM207BP-201ENST00000447172 505 ntBASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 AC139530.3-201ENST00000620344 690 ntBASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 AL121956.5-201ENST00000625261 221 ntBASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CNTNAP3BQ96NU0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.33■□□□□ 0.69
CNTNAP3BQ96NU0 AC004812.2-201ENST00000611079 2094 ntBASIC19.33■□□□□ 0.69
CNTNAP3BQ96NU0 AL024507.2-201ENST00000606070 2574 ntBASIC19.33■□□□□ 0.69
CNTNAP3BQ96NU0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNTNAP3BQ96NU0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 AL022342.1-201ENST00000400363 863 ntBASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 AC092647.4-201ENST00000457211 535 ntBASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 KRT8P10-201ENST00000450021 1447 ntBASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNTNAP3BQ96NU0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 RN7SL510P-201ENST00000581311 263 ntBASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 AC139887.4-201ENST00000607877 719 ntBASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNTNAP3BQ96NU0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms