Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CFAP54Q96N23 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.96■□□□□ 0.79
CFAP54Q96N23 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CFAP54Q96N23 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP54Q96N23 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP54Q96N23 KRT17P6-201ENST00000453795 1220 ntBASIC19.95■□□□□ 0.78
CFAP54Q96N23 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP54Q96N23 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP54Q96N23 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CFAP54Q96N23 TSPY14P-201ENST00000303979 915 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 AC117947.1-201ENST00000427448 529 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 YBX1P2-201ENST00000489612 999 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 INGX-201ENST00000359239 846 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 RNF152P1-201ENST00000397754 604 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 PCED1CP-201ENST00000419887 785 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 TSPY21P-201ENST00000433481 731 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 TSPY23P-201ENST00000440136 739 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CFAP54Q96N23 AL121956.5-201ENST00000625261 221 ntBASIC19.94■□□□□ 0.78
CFAP54Q96N23 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CFAP54Q96N23 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 FAM87A-204ENST00000613235 858 ntBASIC19.93■□□□□ 0.78
CFAP54Q96N23 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CFAP54Q96N23 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CFAP54Q96N23 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.92■□□□□ 0.78
CFAP54Q96N23 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.92■□□□□ 0.78
CFAP54Q96N23 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.92■□□□□ 0.78
CFAP54Q96N23 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 CDV3P1-201ENST00000471403 739 ntBASIC19.92■□□□□ 0.78
CFAP54Q96N23 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CFAP54Q96N23 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CFAP54Q96N23 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CFAP54Q96N23 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CFAP54Q96N23 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.91■□□□□ 0.78
CFAP54Q96N23 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CFAP54Q96N23 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CFAP54Q96N23 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms