Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ITCHQ96J02 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
ITCHQ96J02 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ITCHQ96J02 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.22■□□□□ 0.67
ITCHQ96J02 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITCHQ96J02 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ITCHQ96J02 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.21■□□□□ 0.67
ITCHQ96J02 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.21■□□□□ 0.67
ITCHQ96J02 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ITCHQ96J02 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.21■□□□□ 0.67
ITCHQ96J02 RBM17P2-201ENST00000616397 1405 ntBASIC19.21■□□□□ 0.67
ITCHQ96J02 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ITCHQ96J02 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITCHQ96J02 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
ITCHQ96J02 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.21■□□□□ 0.67
ITCHQ96J02 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.21■□□□□ 0.67
ITCHQ96J02 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
ITCHQ96J02 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
ITCHQ96J02 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.2■□□□□ 0.66
ITCHQ96J02 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.2■□□□□ 0.66
ITCHQ96J02 SLC7A5P1-201ENST00000568957 537 ntBASIC19.2■□□□□ 0.66
ITCHQ96J02 TERF1P2-201ENST00000583350 1212 ntBASIC19.2■□□□□ 0.66
ITCHQ96J02 FAM21FP-204ENST00000608637 956 ntBASIC19.2■□□□□ 0.66
ITCHQ96J02 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.2■□□□□ 0.66
ITCHQ96J02 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.2■□□□□ 0.66
ITCHQ96J02 DPP3P2-201ENST00000416030 1696 ntBASIC19.2■□□□□ 0.66
ITCHQ96J02 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ITCHQ96J02 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.2■□□□□ 0.66
ITCHQ96J02 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.19■□□□□ 0.66
ITCHQ96J02 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ITCHQ96J02 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.19■□□□□ 0.66
ITCHQ96J02 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ITCHQ96J02 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ITCHQ96J02 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ITCHQ96J02 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.19■□□□□ 0.66
ITCHQ96J02 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ITCHQ96J02 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ITCHQ96J02 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.18■□□□□ 0.66
ITCHQ96J02 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ITCHQ96J02 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.17■□□□□ 0.66
ITCHQ96J02 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
ITCHQ96J02 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ITCHQ96J02 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms