Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 AP001412.1-201ENST00000608405 714 ntBASIC20.32■□□□□ 0.84
SIPA1Q96FS4 MIR2861-201ENST00000636310 90 ntBASIC20.32■□□□□ 0.84
SIPA1Q96FS4 KRT8P36-201ENST00000489121 1440 ntBASIC20.32■□□□□ 0.84
SIPA1Q96FS4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIPA1Q96FS4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 AL135905.2-201ENST00000584934 1404 ntBASIC20.31■□□□□ 0.84
SIPA1Q96FS4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.31■□□□□ 0.84
SIPA1Q96FS4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 AC073912.3-201ENST00000624414 853 ntBASIC20.31■□□□□ 0.84
SIPA1Q96FS4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 AC079834.2-201ENST00000609776 1949 ntBASIC20.31■□□□□ 0.84
SIPA1Q96FS4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIPA1Q96FS4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 AC023632.3-201ENST00000521633 145 ntBASIC20.3■□□□□ 0.84
SIPA1Q96FS4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIPA1Q96FS4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 KRT17P2-201ENST00000300992 1314 ntBASIC20.29■□□□□ 0.84
SIPA1Q96FS4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 AL049637.2-201ENST00000641778 930 ntBASIC20.29■□□□□ 0.84
SIPA1Q96FS4 AC121338.2-201ENST00000622535 1744 ntBASIC20.29■□□□□ 0.84
SIPA1Q96FS4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIPA1Q96FS4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 TSPY7P-201ENST00000431358 1114 ntBASIC20.28■□□□□ 0.84
SIPA1Q96FS4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.28■□□□□ 0.84
SIPA1Q96FS4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms