Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.01■■□□□ 1.27
USP6NLQ92738 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.01■■□□□ 1.27
USP6NLQ92738 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.01■■□□□ 1.27
USP6NLQ92738 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP6NLQ92738 AC124283.5-201ENST00000624661 1809 ntBASIC23.01■■□□□ 1.27
USP6NLQ92738 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
USP6NLQ92738 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23■■□□□ 1.27
USP6NLQ92738 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
USP6NLQ92738 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
USP6NLQ92738 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23■■□□□ 1.27
USP6NLQ92738 RBM17P1-201ENST00000453646 1190 ntBASIC23■■□□□ 1.27
USP6NLQ92738 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23■■□□□ 1.27
USP6NLQ92738 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23■■□□□ 1.27
USP6NLQ92738 AC092865.7-201ENST00000641832 219 ntBASIC23■■□□□ 1.27
USP6NLQ92738 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP6NLQ92738 KRT8P9-201ENST00000558927 1449 ntBASIC22.99■■□□□ 1.27
USP6NLQ92738 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 AC079598.2-202ENST00000546624 1451 ntBASIC22.99■■□□□ 1.27
USP6NLQ92738 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.99■■□□□ 1.27
USP6NLQ92738 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.99■■□□□ 1.27
USP6NLQ92738 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.99■■□□□ 1.27
USP6NLQ92738 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 MIR6786-201ENST00000616843 113 ntBASIC22.99■■□□□ 1.27
USP6NLQ92738 AL117328.2-201ENST00000624617 1940 ntBASIC22.99■■□□□ 1.27
USP6NLQ92738 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.99■■□□□ 1.27
USP6NLQ92738 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP6NLQ92738 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.99■■□□□ 1.27
USP6NLQ92738 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
USP6NLQ92738 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.98■■□□□ 1.27
USP6NLQ92738 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.98■■□□□ 1.27
USP6NLQ92738 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.98■■□□□ 1.27
USP6NLQ92738 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.98■■□□□ 1.27
USP6NLQ92738 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.98■■□□□ 1.27
USP6NLQ92738 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
USP6NLQ92738 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.97■■□□□ 1.27
USP6NLQ92738 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.97■■□□□ 1.27
USP6NLQ92738 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.97■■□□□ 1.27
USP6NLQ92738 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.97■■□□□ 1.27
USP6NLQ92738 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
USP6NLQ92738 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USP6NLQ92738 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.97■■□□□ 1.27
USP6NLQ92738 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
USP6NLQ92738 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.97■■□□□ 1.27
USP6NLQ92738 NUDT16P1-203ENST00000513809 620 ntBASIC22.97■■□□□ 1.27
USP6NLQ92738 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
USP6NLQ92738 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
USP6NLQ92738 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
USP6NLQ92738 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP6NLQ92738 AC242852.2-201ENST00000615738 1807 ntBASIC22.96■■□□□ 1.27
USP6NLQ92738 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
USP6NLQ92738 AC011484.1-201ENST00000377652 1995 ntBASIC22.96■■□□□ 1.27
USP6NLQ92738 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.96■■□□□ 1.27
USP6NLQ92738 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.96■■□□□ 1.27
USP6NLQ92738 REXO1L10P-201ENST00000615707 1290 ntBASIC22.96■■□□□ 1.27
USP6NLQ92738 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
USP6NLQ92738 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.96■■□□□ 1.27
USP6NLQ92738 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.96■■□□□ 1.27
USP6NLQ92738 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
USP6NLQ92738 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.96■■□□□ 1.27
USP6NLQ92738 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms