Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AP004607.7-201ENST00000527152 1677 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 KRT18P1-202ENST00000452408 1331 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AF228730.6-201ENST00000641497 218 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC084121.3-201ENST00000641716 218 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC105233.6-201ENST00000642093 218 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC138761.1-201ENST00000584393 385 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 FOSL1P1-201ENST00000511041 816 ntBASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC8.3□□□□□ -1.08
SYNE2Q8WXH0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AC140113.3-201ENST00000605663 199 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AL031985.4-201ENST00000642138 673 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 HIST1H2APS4-201ENST00000362070 348 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 KRT18P31-201ENST00000506277 1292 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AC012615.1-201ENST00000565797 1299 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 FSCN1P1-201ENST00000568912 1481 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 DUSP8P3-201ENST00000399571 1760 ntBASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
SYNE2Q8WXH0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 NIFKP9-201ENST00000419265 221 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 SPDYE15P-201ENST00000424157 909 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms