Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.66■■■□□ 2.66
CASKIN1Q8WXD9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 PRKY-204ENST00000533551 1019 ntBASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CASKIN1Q8WXD9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CASKIN1Q8WXD9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
CASKIN1Q8WXD9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 AL121603.2-201ENST00000557373 2117 ntBASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.63■■■□□ 2.65
CASKIN1Q8WXD9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 MIR4785-201ENST00000585005 73 ntBASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CASKIN1Q8WXD9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 AL355075.4-201ENST00000554988 638 ntBASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 AP001412.1-201ENST00000608405 714 ntBASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 PLK5-205ENST00000642079 1969 ntBASIC31.61■■■□□ 2.65
CASKIN1Q8WXD9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 KRT16P5-201ENST00000455284 522 ntBASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 AL031963.3-201ENST00000606441 850 ntBASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
CASKIN1Q8WXD9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
CASKIN1Q8WXD9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms