Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.07■□□□□ 0.8
CKAP2Q8WWK9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 DPP3P2-201ENST00000416030 1696 ntBASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CKAP2Q8WWK9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKAP2Q8WWK9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 LETM1P2-201ENST00000597330 2178 ntBASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CKAP2Q8WWK9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CKAP2Q8WWK9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 BX842568.3-201ENST00000418104 571 ntBASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.02■□□□□ 0.8
CKAP2Q8WWK9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms