Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF217Q8TC41 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF217Q8TC41 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF217Q8TC41 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF217Q8TC41 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 AC009237.3-201ENST00000393279 1427 ntBASIC19.31■□□□□ 0.68
RNF217Q8TC41 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.31■□□□□ 0.68
RNF217Q8TC41 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 RASA4CP-201ENST00000424092 1398 ntBASIC19.31■□□□□ 0.68
RNF217Q8TC41 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RNF217Q8TC41 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF217Q8TC41 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF217Q8TC41 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 AC099398.1-201ENST00000567919 2776 ntBASIC19.29■□□□□ 0.68
RNF217Q8TC41 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF217Q8TC41 AC091305.1-201ENST00000479476 895 ntBASIC19.29■□□□□ 0.68
RNF217Q8TC41 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF217Q8TC41 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF217Q8TC41 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF217Q8TC41 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF217Q8TC41 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms