Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 AC104771.1-201ENST00000603335 964 ntBASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 AC005181.1-201ENST00000604782 1256 ntBASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 AL355472.2-201ENST00000422958 438 ntBASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 OR10C1-204ENST00000622521 1039 ntBASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 AC008694.1-202ENST00000636953 945 ntBASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDH19Q8TAB3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDH19Q8TAB3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
PCDH19Q8TAB3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDH19Q8TAB3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDH19Q8TAB3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDH19Q8TAB3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 AC093787.1-201ENST00000450396 207 ntBASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH19Q8TAB3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AC010980.2-201ENST00000587099 1412 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 KRT18P68-201ENST00000392293 1000 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 CYP2T3P-201ENST00000601990 817 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AL109923.1-201ENST00000618799 583 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AL050303.2-201ENST00000619798 666 ntBASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH19Q8TAB3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 NCF1B-203ENST00000435988 1254 ntBASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH19Q8TAB3 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms