Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 AC116562.4-201ENST00000641316 2276 ntBASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DNAAF1Q8NEP3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 AC105265.2-201ENST00000467189 838 ntBASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DNAAF1Q8NEP3 KRT16P2-201ENST00000414673 1423 ntBASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 LINC02228-203ENST00000641970 1355 ntBASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 AC120498.10-201ENST00000621827 505 ntBASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
DNAAF1Q8NEP3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 AL158211.5-201ENST00000623583 2518 ntBASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 AC125437.2-201ENST00000625180 2167 ntBASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 BX323043.1-201ENST00000641006 1765 ntBASIC17.71■□□□□ 0.43
DNAAF1Q8NEP3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
DNAAF1Q8NEP3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.71■□□□□ 0.42
DNAAF1Q8NEP3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 AC018445.3-201ENST00000624177 1945 ntBASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DNAAF1Q8NEP3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF1Q8NEP3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF1Q8NEP3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF1Q8NEP3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DNAAF1Q8NEP3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms