Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 AC016769.1-201ENST00000409132 1010 ntBASIC19.72■□□□□ 0.75
CPSF7Q8N684 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPSF7Q8N684 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.72■□□□□ 0.75
CPSF7Q8N684 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CPSF7Q8N684 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPSF7Q8N684 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 AC079140.4-201ENST00000507448 529 ntBASIC19.7■□□□□ 0.74
CPSF7Q8N684 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CPSF7Q8N684 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.7■□□□□ 0.74
CPSF7Q8N684 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CPSF7Q8N684 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 AL158211.5-201ENST00000623583 2518 ntBASIC19.69■□□□□ 0.74
CPSF7Q8N684 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 AC006015.1-201ENST00000429970 570 ntBASIC19.69■□□□□ 0.74
CPSF7Q8N684 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CPSF7Q8N684 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CPSF7Q8N684 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 AC098818.2-201ENST00000564925 2320 ntBASIC19.68■□□□□ 0.74
CPSF7Q8N684 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 KRT19P1-201ENST00000405746 1186 ntBASIC19.68■□□□□ 0.74
CPSF7Q8N684 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.68■□□□□ 0.74
CPSF7Q8N684 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
CPSF7Q8N684 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms