Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 AC137761.2-201ENST00000561729 223 ntBASIC16.72■□□□□ 0.27
COMMD1Q8N668 AC145350.3-201ENST00000569033 163 ntBASIC16.72■□□□□ 0.27
COMMD1Q8N668 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.72■□□□□ 0.27
COMMD1Q8N668 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COMMD1Q8N668 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.72■□□□□ 0.27
COMMD1Q8N668 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 AC004854.2-201ENST00000608450 1441 ntBASIC16.71■□□□□ 0.27
COMMD1Q8N668 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COMMD1Q8N668 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.71■□□□□ 0.27
COMMD1Q8N668 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
COMMD1Q8N668 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 AC026471.1-201ENST00000564629 3026 ntBASIC16.7■□□□□ 0.26
COMMD1Q8N668 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
COMMD1Q8N668 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
COMMD1Q8N668 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 AC027702.1-201ENST00000563810 1770 ntBASIC16.69■□□□□ 0.26
COMMD1Q8N668 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
COMMD1Q8N668 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
COMMD1Q8N668 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 AC116562.4-201ENST00000641316 2276 ntBASIC16.68■□□□□ 0.26
COMMD1Q8N668 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 AC006015.1-201ENST00000429970 570 ntBASIC16.68■□□□□ 0.26
COMMD1Q8N668 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 AP006587.3-201ENST00000525742 1516 ntBASIC16.68■□□□□ 0.26
COMMD1Q8N668 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COMMD1Q8N668 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COMMD1Q8N668 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COMMD1Q8N668 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms