Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 AL391422.3-201ENST00000603791 2761 ntBASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 AC128676.1-201ENST00000454392 318 ntBASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 AL121603.2-201ENST00000557373 2117 ntBASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 AC007225.1-201ENST00000566331 1836 ntBASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC33Q8N5R6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC33Q8N5R6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 GCSHP5-201ENST00000443090 522 ntBASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC33Q8N5R6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 AC116050.2-201ENST00000612102 1779 ntBASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 AC142381.4-202ENST00000563973 229 ntBASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 AC027702.1-201ENST00000563810 1770 ntBASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC33Q8N5R6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC33Q8N5R6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC33Q8N5R6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC33Q8N5R6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC33Q8N5R6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC33Q8N5R6 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 UNC93B5-201ENST00000530315 699 ntBASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CCDC33Q8N5R6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms