Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.78■■■□□ 2.68
VPS8Q8N3P4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 KRT18P29-201ENST00000397031 1267 ntBASIC31.77■■■□□ 2.68
VPS8Q8N3P4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 AC006557.6-201ENST00000623071 864 ntBASIC31.77■■■□□ 2.68
VPS8Q8N3P4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
VPS8Q8N3P4 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC31.76■■■□□ 2.68
VPS8Q8N3P4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.76■■■□□ 2.68
VPS8Q8N3P4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.68
VPS8Q8N3P4 GCSHP5-201ENST00000443090 522 ntBASIC31.76■■■□□ 2.68
VPS8Q8N3P4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.68
VPS8Q8N3P4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.67
VPS8Q8N3P4 AC092720.2-201ENST00000602388 1665 ntBASIC31.76■■■□□ 2.67
VPS8Q8N3P4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
VPS8Q8N3P4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
VPS8Q8N3P4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
VPS8Q8N3P4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 DPP3P2-201ENST00000416030 1696 ntBASIC31.75■■■□□ 2.67
VPS8Q8N3P4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.75■■■□□ 2.67
VPS8Q8N3P4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.74■■■□□ 2.67
VPS8Q8N3P4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
VPS8Q8N3P4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 RPS2P52-201ENST00000469610 820 ntBASIC31.73■■■□□ 2.67
VPS8Q8N3P4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
VPS8Q8N3P4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
VPS8Q8N3P4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 AP005212.1-201ENST00000581547 1997 ntBASIC31.71■■■□□ 2.67
VPS8Q8N3P4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC31.71■■■□□ 2.67
VPS8Q8N3P4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 AC120498.8-201ENST00000614275 531 ntBASIC31.7■■■□□ 2.67
VPS8Q8N3P4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
VPS8Q8N3P4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 AL390719.1-204ENST00000412397 1219 ntBASIC31.69■■■□□ 2.66
VPS8Q8N3P4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 AC073314.1-201ENST00000568729 2216 ntBASIC31.69■■■□□ 2.66
VPS8Q8N3P4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 AC124283.5-201ENST00000624661 1809 ntBASIC31.69■■■□□ 2.66
VPS8Q8N3P4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
VPS8Q8N3P4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
VPS8Q8N3P4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
VPS8Q8N3P4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
VPS8Q8N3P4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC31.68■■■□□ 2.66
VPS8Q8N3P4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms