Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
ARHGEF28Q8N1W1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
ARHGEF28Q8N1W1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 H19-201ENST00000411754 1788 ntTSL 5 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF28Q8N1W1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 AL121603.2-201ENST00000557373 2117 ntBASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF28Q8N1W1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 AL135905.2-201ENST00000584934 1404 ntBASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF28Q8N1W1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
ARHGEF28Q8N1W1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC28.2■■■□□ 2.11
ARHGEF28Q8N1W1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
ARHGEF28Q8N1W1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 MIR4785-201ENST00000585005 73 ntBASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 AL031963.3-201ENST00000606441 850 ntBASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC28.2■■■□□ 2.1
ARHGEF28Q8N1W1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 KRT16P5-201ENST00000455284 522 ntBASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC28.19■■■□□ 2.1
ARHGEF28Q8N1W1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 PRKY-204ENST00000533551 1019 ntBASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC28.18■■■□□ 2.1
ARHGEF28Q8N1W1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms