Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.75■□□□□ 0.91
SIX5Q8N196 NBPF21P-201ENST00000425093 1451 ntBASIC20.75■□□□□ 0.91
SIX5Q8N196 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SIX5Q8N196 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SIX5Q8N196 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SIX5Q8N196 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SIX5Q8N196 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.74■□□□□ 0.91
SIX5Q8N196 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.74■□□□□ 0.91
SIX5Q8N196 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.74■□□□□ 0.91
SIX5Q8N196 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.74■□□□□ 0.91
SIX5Q8N196 NUDT16P1-203ENST00000513809 620 ntBASIC20.74■□□□□ 0.91
SIX5Q8N196 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.74■□□□□ 0.91
SIX5Q8N196 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.74■□□□□ 0.91
SIX5Q8N196 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SIX5Q8N196 AL031963.3-201ENST00000606441 850 ntBASIC20.74■□□□□ 0.91
SIX5Q8N196 REXO1L10P-201ENST00000615707 1290 ntBASIC20.74■□□□□ 0.91
SIX5Q8N196 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SIX5Q8N196 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SIX5Q8N196 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SIX5Q8N196 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.73■□□□□ 0.91
SIX5Q8N196 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.73■□□□□ 0.91
SIX5Q8N196 AL137013.1-201ENST00000432946 1228 ntBASIC20.73■□□□□ 0.91
SIX5Q8N196 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.73■□□□□ 0.91
SIX5Q8N196 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.73■□□□□ 0.91
SIX5Q8N196 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.73■□□□□ 0.91
SIX5Q8N196 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.73■□□□□ 0.91
SIX5Q8N196 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.73■□□□□ 0.91
SIX5Q8N196 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 FAM99A-202ENST00000538190 1989 ntBASIC20.73■□□□□ 0.91
SIX5Q8N196 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SIX5Q8N196 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SIX5Q8N196 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SIX5Q8N196 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 AC080038.3-201ENST00000623346 1952 ntBASIC20.72■□□□□ 0.91
SIX5Q8N196 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 TERF1P1-201ENST00000311003 1181 ntBASIC20.72■□□□□ 0.91
SIX5Q8N196 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.72■□□□□ 0.91
SIX5Q8N196 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.72■□□□□ 0.91
SIX5Q8N196 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.72■□□□□ 0.91
SIX5Q8N196 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
SIX5Q8N196 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.72■□□□□ 0.91
SIX5Q8N196 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SIX5Q8N196 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SIX5Q8N196 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
SIX5Q8N196 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.71■□□□□ 0.91
SIX5Q8N196 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.71■□□□□ 0.91
SIX5Q8N196 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.71■□□□□ 0.91
SIX5Q8N196 NAPSB-206ENST00000562112 1266 ntBASIC20.71■□□□□ 0.91
SIX5Q8N196 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 NTF6B-201ENST00000591913 560 ntBASIC20.71■□□□□ 0.91
SIX5Q8N196 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.71■□□□□ 0.91
SIX5Q8N196 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.71■□□□□ 0.91
SIX5Q8N196 KRT18P22-201ENST00000402024 1347 ntBASIC20.71■□□□□ 0.91
SIX5Q8N196 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.71■□□□□ 0.91
SIX5Q8N196 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SIX5Q8N196 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SIX5Q8N196 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SIX5Q8N196 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SIX5Q8N196 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
SIX5Q8N196 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SIX5Q8N196 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SIX5Q8N196 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.7■□□□□ 0.9
SIX5Q8N196 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.7■□□□□ 0.9
SIX5Q8N196 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.7■□□□□ 0.9
SIX5Q8N196 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms