Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 GABARAPL3-202ENST00000624044 1851 ntBASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC146Q8IYE0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 AC133041.1-202ENST00000642053 222 ntBASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC146Q8IYE0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC146Q8IYE0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC146Q8IYE0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 AC073210.2-201ENST00000430369 194 ntBASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC146Q8IYE0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 AC097658.1-201ENST00000475555 843 ntBASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC146Q8IYE0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CCDC146Q8IYE0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
CCDC146Q8IYE0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 PTBP1P-201ENST00000554374 1601 ntBASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
CCDC146Q8IYE0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms