Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC65Q8IXS2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC65Q8IXS2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.45■■□□□ 1.19
CCDC65Q8IXS2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC65Q8IXS2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 AC073130.3-201ENST00000624389 2278 ntBASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 CROCCP5-201ENST00000436658 830 ntBASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC65Q8IXS2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 AF201337.1-201ENST00000520239 748 ntBASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 SMG8-203ENST00000578922 2178 ntBASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC65Q8IXS2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 AC105036.2-201ENST00000569468 176 ntBASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 AL589743.5-201ENST00000616611 1050 ntBASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC65Q8IXS2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 AC006970.2-201ENST00000450065 779 ntBASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC65Q8IXS2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 MKRN4P-201ENST00000444706 1521 ntBASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
CCDC65Q8IXS2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC65Q8IXS2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC65Q8IXS2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms