Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC073210.2-201ENST00000430369 194 ntBASIC21.28■■□□□ 1
SCUBE3Q8IX30 AC069152.1-201ENST00000438030 544 ntBASIC21.28■■□□□ 1
SCUBE3Q8IX30 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 AC133041.1-202ENST00000642053 222 ntBASIC21.28■■□□□ 1
SCUBE3Q8IX30 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 GABARAPL3-202ENST00000624044 1851 ntBASIC21.28■■□□□ 1
SCUBE3Q8IX30 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.28■■□□□ 1
SCUBE3Q8IX30 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SCUBE3Q8IX30 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.27■■□□□ 1
SCUBE3Q8IX30 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SCUBE3Q8IX30 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SCUBE3Q8IX30 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.27■■□□□ 1
SCUBE3Q8IX30 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SCUBE3Q8IX30 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.27■■□□□ 1
SCUBE3Q8IX30 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SCUBE3Q8IX30 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 SMG8-203ENST00000578922 2178 ntBASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 AC097658.1-201ENST00000475555 843 ntBASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCUBE3Q8IX30 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 DPP3P2-201ENST00000416030 1696 ntBASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 AL512408.1-201ENST00000569378 2000 ntBASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 MYC-209ENST00000641252 345 ntBASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.25■□□□□ 0.99
SCUBE3Q8IX30 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.24■□□□□ 0.99
SCUBE3Q8IX30 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.23■□□□□ 0.99
SCUBE3Q8IX30 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms