Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM48Q8IWZ4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 UNC93B5-201ENST00000530315 699 ntBASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TRIM48Q8IWZ4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 AP003097.1-201ENST00000530657 1135 ntBASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 PNMA6B-201ENST00000538162 1200 ntBASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM48Q8IWZ4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 MIR2861-201ENST00000636310 90 ntBASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM48Q8IWZ4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 AC026310.3-201ENST00000625186 2373 ntBASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 AC026366.1-201ENST00000488803 879 ntBASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM48Q8IWZ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM48Q8IWZ4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms