Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 AC112907.3-201ENST00000577781 2400 ntBASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDKL3Q8IVW4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 TCF3P1-201ENST00000423021 1937 ntBASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 AC006015.1-201ENST00000429970 570 ntBASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKL3Q8IVW4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL3Q8IVW4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.77■□□□□ 0.91
CDKL3Q8IVW4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL3Q8IVW4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.77■□□□□ 0.91
CDKL3Q8IVW4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKL3Q8IVW4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 DUX4L16-201ENST00000555130 1264 ntBASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 MIR5787-201ENST00000611784 55 ntBASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKL3Q8IVW4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 CNN2P6-201ENST00000439038 900 ntBASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 RARRES2P4-201ENST00000514074 484 ntBASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 AC011767.1-201ENST00000617410 1153 ntBASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 PCDHAC2-203ENST00000615316 3011 ntBASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKL3Q8IVW4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 AL162430.1-201ENST00000480705 870 ntBASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.74■□□□□ 0.91
CDKL3Q8IVW4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CDKL3Q8IVW4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms