Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 AP003071.4-201ENST00000562276 1284 ntBASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.8■■□□□ 1.08
NPAS4Q8IUM7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 AL355355.2-201ENST00000442321 338 ntBASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 CD177P1-201ENST00000606252 935 ntBASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.79■■□□□ 1.08
NPAS4Q8IUM7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NPAS4Q8IUM7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 AL353708.3-201ENST00000610272 989 ntBASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 Z98882.1-201ENST00000622160 2253 ntBASIC21.77■■□□□ 1.08
NPAS4Q8IUM7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NPAS4Q8IUM7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
NPAS4Q8IUM7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.77■■□□□ 1.07
NPAS4Q8IUM7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NPAS4Q8IUM7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 FAM197Y1-201ENST00000421178 764 ntBASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 AC073195.1-201ENST00000607241 877 ntBASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
NPAS4Q8IUM7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms