Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 TERF1P1-201ENST00000311003 1181 ntBASIC20.97■□□□□ 0.95
DENND4AQ7Z401 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 AC116562.2-201ENST00000507042 360 ntBASIC20.97■□□□□ 0.95
DENND4AQ7Z401 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 KRT16P1-201ENST00000399124 1418 ntBASIC20.97■□□□□ 0.95
DENND4AQ7Z401 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DENND4AQ7Z401 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 SLC25A3P1-201ENST00000443844 931 ntBASIC20.96■□□□□ 0.95
DENND4AQ7Z401 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 AC073195.1-201ENST00000607241 877 ntBASIC20.96■□□□□ 0.95
DENND4AQ7Z401 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.96■□□□□ 0.95
DENND4AQ7Z401 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
DENND4AQ7Z401 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DENND4AQ7Z401 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.94■□□□□ 0.94
DENND4AQ7Z401 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 PTBP1P-201ENST00000554374 1601 ntBASIC20.93■□□□□ 0.94
DENND4AQ7Z401 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DENND4AQ7Z401 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 CYP2D8P-201ENST00000433633 1490 ntBASIC20.92■□□□□ 0.94
DENND4AQ7Z401 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.92■□□□□ 0.94
DENND4AQ7Z401 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
DENND4AQ7Z401 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DENND4AQ7Z401 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms