Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HIST2H3AQ71DI3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.76■□□□□ 0.43
HIST2H3AQ71DI3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIST2H3AQ71DI3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 AC092437.1-201ENST00000624794 1048 ntBASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIST2H3AQ71DI3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 AC007322.1-201ENST00000426983 750 ntBASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HIST2H3AQ71DI3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 AC099778.1-201ENST00000568593 1911 ntBASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.72■□□□□ 0.43
HIST2H3AQ71DI3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST2H3AQ71DI3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms