Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 AC073648.6-201ENST00000641589 218 ntBASIC24.03■■□□□ 1.44
CTR9Q6PD62 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CTR9Q6PD62 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.03■■□□□ 1.44
CTR9Q6PD62 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 AC006557.6-201ENST00000623071 864 ntBASIC24.02■■□□□ 1.44
CTR9Q6PD62 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CTR9Q6PD62 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CTR9Q6PD62 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.01■■□□□ 1.43
CTR9Q6PD62 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CTR9Q6PD62 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24■■□□□ 1.43
CTR9Q6PD62 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24■■□□□ 1.43
CTR9Q6PD62 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 AC098590.1-201ENST00000468126 897 ntBASIC24■■□□□ 1.43
CTR9Q6PD62 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CTR9Q6PD62 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CTR9Q6PD62 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24■■□□□ 1.43
CTR9Q6PD62 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.99■■□□□ 1.43
CTR9Q6PD62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CTR9Q6PD62 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTR9Q6PD62 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTR9Q6PD62 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTR9Q6PD62 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 AC233263.1-201ENST00000578059 224 ntBASIC23.98■■□□□ 1.43
CTR9Q6PD62 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CTR9Q6PD62 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 PTBP1P-201ENST00000554374 1601 ntBASIC23.98■■□□□ 1.43
CTR9Q6PD62 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.98■■□□□ 1.43
CTR9Q6PD62 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms