Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 KRT17P1-201ENST00000399211 1546 ntBASIC21.16■□□□□ 0.98
RNF43Q68DV7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 ESRRAP1-201ENST00000400596 1257 ntBASIC21.16■□□□□ 0.98
RNF43Q68DV7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 RPS2P4-201ENST00000476944 856 ntBASIC21.16■□□□□ 0.98
RNF43Q68DV7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF43Q68DV7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF43Q68DV7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 CYP21A1P-202ENST00000354927 1481 ntBASIC21.15■□□□□ 0.98
RNF43Q68DV7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 AL355472.2-201ENST00000422958 438 ntBASIC21.15■□□□□ 0.98
RNF43Q68DV7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF43Q68DV7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF43Q68DV7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF43Q68DV7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF43Q68DV7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF43Q68DV7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF43Q68DV7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF43Q68DV7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RNF43Q68DV7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 AC142381.4-202ENST00000563973 229 ntBASIC21.14■□□□□ 0.97
RNF43Q68DV7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF43Q68DV7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF43Q68DV7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF43Q68DV7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF43Q68DV7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF43Q68DV7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.12■□□□□ 0.97
RNF43Q68DV7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms