Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZNF444P1-201ENST00000559497 298 ntBASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL13A1Q5TAT6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 MIR564-202ENST00000385049 94 ntBASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 AP002469.2-201ENST00000531724 424 ntBASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 AC140113.3-201ENST00000605663 199 ntBASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 AC083849.1-201ENST00000615227 514 ntBASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 AC116562.4-202ENST00000641738 218 ntBASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.04■■□□□ 1.28
COL13A1Q5TAT6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 AL121749.1-202ENST00000609313 2153 ntBASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 AL023973.1-201ENST00000624619 620 ntBASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL13A1Q5TAT6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 MRPL3P1-201ENST00000400109 1033 ntBASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 HLA-J-202ENST00000469281 1241 ntBASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 AL662844.1-201ENST00000546340 181 ntBASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 MIR3197-201ENST00000582241 73 ntBASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL13A1Q5TAT6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 B3GAT3P1-201ENST00000471720 806 ntBASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL13A1Q5TAT6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
COL13A1Q5TAT6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL13A1Q5TAT6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms