Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CERKLQ49MI3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CERKLQ49MI3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.76■■□□□ 1.39
CERKLQ49MI3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 KRASP1-201ENST00000407852 552 ntBASIC23.75■■□□□ 1.39
CERKLQ49MI3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CERKLQ49MI3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CERKLQ49MI3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CERKLQ49MI3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CERKLQ49MI3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 MIR4497-201ENST00000583208 89 ntBASIC23.74■■□□□ 1.39
CERKLQ49MI3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 AC110285.5-201ENST00000611501 352 ntBASIC23.74■■□□□ 1.39
CERKLQ49MI3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CERKLQ49MI3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.74■■□□□ 1.39
CERKLQ49MI3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC23.73■■□□□ 1.39
CERKLQ49MI3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.73■■□□□ 1.39
CERKLQ49MI3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.73■■□□□ 1.39
CERKLQ49MI3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.73■■□□□ 1.39
CERKLQ49MI3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CERKLQ49MI3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CERKLQ49MI3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 LINC00565-201ENST00000562710 2331 ntBASIC23.72■■□□□ 1.39
CERKLQ49MI3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.72■■□□□ 1.39
CERKLQ49MI3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 AL121603.2-201ENST00000557373 2117 ntBASIC23.71■■□□□ 1.39
CERKLQ49MI3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 SNORA78-201ENST00000459373 127 ntBASIC23.71■■□□□ 1.39
CERKLQ49MI3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.71■■□□□ 1.39
CERKLQ49MI3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CERKLQ49MI3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CERKLQ49MI3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CERKLQ49MI3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.7■■□□□ 1.39
CERKLQ49MI3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CERKLQ49MI3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
CERKLQ49MI3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CERKLQ49MI3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.7■■□□□ 1.38
CERKLQ49MI3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.7■■□□□ 1.38
CERKLQ49MI3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CERKLQ49MI3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CERKLQ49MI3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CERKLQ49MI3 PRKY-204ENST00000533551 1019 ntBASIC23.7■■□□□ 1.38
CERKLQ49MI3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.7■■□□□ 1.38
CERKLQ49MI3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CERKLQ49MI3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CERKLQ49MI3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.69■■□□□ 1.38
CERKLQ49MI3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CERKLQ49MI3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CERKLQ49MI3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
CERKLQ49MI3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CERKLQ49MI3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CERKLQ49MI3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms