Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.25■■□□□ 1.31
USH1GQ495M9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.25■■□□□ 1.31
USH1GQ495M9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.25■■□□□ 1.31
USH1GQ495M9 AL390719.1-204ENST00000412397 1219 ntBASIC23.25■■□□□ 1.31
USH1GQ495M9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
USH1GQ495M9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.25■■□□□ 1.31
USH1GQ495M9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
USH1GQ495M9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.24■■□□□ 1.31
USH1GQ495M9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
USH1GQ495M9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
USH1GQ495M9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
USH1GQ495M9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 C1QBPP2-201ENST00000528754 825 ntBASIC23.24■■□□□ 1.31
USH1GQ495M9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.24■■□□□ 1.31
USH1GQ495M9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
USH1GQ495M9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
USH1GQ495M9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.24■■□□□ 1.31
USH1GQ495M9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.23■■□□□ 1.31
USH1GQ495M9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
USH1GQ495M9 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.23■■□□□ 1.31
USH1GQ495M9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
USH1GQ495M9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.23■■□□□ 1.31
USH1GQ495M9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.23■■□□□ 1.31
USH1GQ495M9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.23■■□□□ 1.31
USH1GQ495M9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
USH1GQ495M9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
USH1GQ495M9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.22■■□□□ 1.31
USH1GQ495M9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.22■■□□□ 1.31
USH1GQ495M9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
USH1GQ495M9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC23.22■■□□□ 1.31
USH1GQ495M9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 AL359736.2-201ENST00000621992 437 ntBASIC23.22■■□□□ 1.31
USH1GQ495M9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.22■■□□□ 1.31
USH1GQ495M9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 AL137060.1-201ENST00000618151 2648 ntBASIC23.22■■□□□ 1.31
USH1GQ495M9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
USH1GQ495M9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
USH1GQ495M9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
USH1GQ495M9 AC120498.8-201ENST00000614275 531 ntBASIC23.21■■□□□ 1.31
USH1GQ495M9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
USH1GQ495M9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
USH1GQ495M9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.21■■□□□ 1.31
USH1GQ495M9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
USH1GQ495M9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
USH1GQ495M9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.21■■□□□ 1.31
USH1GQ495M9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.2■■□□□ 1.3
USH1GQ495M9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
USH1GQ495M9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
USH1GQ495M9 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.2■■□□□ 1.3
USH1GQ495M9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
USH1GQ495M9 RPPH1-201ENST00000516869 333 ntBASIC23.2■■□□□ 1.3
USH1GQ495M9 RN7SL471P-201ENST00000580476 299 ntBASIC23.2■■□□□ 1.3
USH1GQ495M9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
USH1GQ495M9 AC007225.1-201ENST00000566331 1836 ntBASIC23.19■■□□□ 1.3
USH1GQ495M9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
USH1GQ495M9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.19■■□□□ 1.3
USH1GQ495M9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
USH1GQ495M9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms