Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC144BQ3MJ40 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.44■■□□□ 1.34
CCDC144BQ3MJ40 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 AL049796.1-201ENST00000565336 1766 ntBASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 KRT18P68-201ENST00000392293 1000 ntBASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 PKD1P6-201ENST00000343738 4769 ntBASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
CCDC144BQ3MJ40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CCDC144BQ3MJ40 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 AL359736.2-201ENST00000621992 437 ntBASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.41■■□□□ 1.34
CCDC144BQ3MJ40 AL391422.3-201ENST00000603791 2761 ntBASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 AC007322.3-201ENST00000426526 701 ntBASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 PNMA6B-201ENST00000538162 1200 ntBASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CCDC144BQ3MJ40 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CCDC144BQ3MJ40 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CCDC144BQ3MJ40 AC008550.1-201ENST00000511500 884 ntBASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms