Protein–RNA interactions for Protein: Q08964

YPL216W, Putative ISWI chromatin-remodeling complex subunit YPL216W, yeastyeast

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL216WQ08964 SAP190YKR028W 3102 nt2.36□□□□□ -2.03
YPL216WQ08964 TAE2YPL009C 3117 nt2.36□□□□□ -2.03
YPL216WQ08964 STB4YMR019W 2850 nt2.35□□□□□ -2.03
YPL216WQ08964 FAR11YNL127W 2862 nt2.35□□□□□ -2.03
YPL216WQ08964 YGL188C-AYGL188C-A 141 nt2.35□□□□□ -2.03
YPL216WQ08964 YJL052C-AYJL052C-A 120 nt2.35□□□□□ -2.03
YPL216WQ08964 RPL38YLR325C 237 nt2.35□□□□□ -2.03
YPL216WQ08964 YBR224WYBR224W 516 nt2.35□□□□□ -2.03
YPL216WQ08964 UTP22YGR090W 3714 nt2.34□□□□□ -2.03
YPL216WQ08964 TOR1YJR066W 7413 nt2.34□□□□□ -2.03
YPL216WQ08964 GIS1YDR096W 2685 nt2.34□□□□□ -2.03
YPL216WQ08964 SNC1YAL030W 354 nt2.34□□□□□ -2.03
YPL216WQ08964 YLR053CYLR053C 327 nt2.34□□□□□ -2.03
YPL216WQ08964 RPS29AYLR388W 171 nt2.34□□□□□ -2.03
YPL216WQ08964 NUT2YPR168W 474 nt2.34□□□□□ -2.03
YPL216WQ08964 VMA9YCL005W-A 222 nt2.34□□□□□ -2.03
YPL216WQ08964 SMC6YLR383W 3345 nt2.34□□□□□ -2.03
YPL216WQ08964 YLR149CYLR149C 2193 nt2.34□□□□□ -2.04
YPL216WQ08964 IRC8YJL051W 2469 nt2.34□□□□□ -2.04
YPL216WQ08964 YEL043WYEL043W 2871 nt2.34□□□□□ -2.04
YPL216WQ08964 RIM20YOR275C 1986 nt2.34□□□□□ -2.04
YPL216WQ08964 YLL032CYLL032C 2478 nt2.33□□□□□ -2.04
YPL216WQ08964 tM(CAU)Q1tM(CAU)Q1 76 nt2.33□□□□□ -2.04
YPL216WQ08964 HHT1YBR010W 411 nt2.33□□□□□ -2.04
YPL216WQ08964 YOR225WYOR225W 330 nt2.33□□□□□ -2.04
YPL216WQ08964 SOK2YMR016C 2358 nt2.33□□□□□ -2.04
YPL216WQ08964 SEF1YBL066C 3447 nt2.33□□□□□ -2.04
YPL216WQ08964 CDC27YBL084C 2277 nt2.33□□□□□ -2.04
YPL216WQ08964 HSC82YMR186W 2118 nt2.32□□□□□ -2.04
YPL216WQ08964 YCR018C-AYCR018C-A 255 nt2.32□□□□□ -2.04
YPL216WQ08964 YDL211CYDL211C 1119 nt2.32□□□□□ -2.04
YPL216WQ08964 DGR1YNL130C-A 147 nt2.32□□□□□ -2.04
YPL216WQ08964 DAD3YBR233W-A 285 nt2.32□□□□□ -2.04
YPL216WQ08964 RAD61YDR014W 1944 nt2.32□□□□□ -2.04
YPL216WQ08964 AFI1YOR129C 2682 nt2.32□□□□□ -2.04
YPL216WQ08964 MDM20YOL076W 2391 nt2.31□□□□□ -2.04
YPL216WQ08964 MCD1YDL003W 1701 nt2.31□□□□□ -2.04
YPL216WQ08964 NPC2YDL046W 522 nt2.31□□□□□ -2.04
YPL216WQ08964 YIL032CYIL032C 357 nt2.31□□□□□ -2.04
YPL216WQ08964 YKL183C-AYKL183C-A 213 nt2.31□□□□□ -2.04
YPL216WQ08964 YOR333CYOR333C 417 nt2.31□□□□□ -2.04
YPL216WQ08964 RIC1YLR039C 3171 nt2.31□□□□□ -2.04
YPL216WQ08964 ARP7YPR034W 1434 nt2.31□□□□□ -2.04
YPL216WQ08964 PEP3YLR148W 2757 nt2.31□□□□□ -2.04
YPL216WQ08964 PEX8YGR077C 1770 nt2.31□□□□□ -2.04
YPL216WQ08964 COG8YML071C 1824 nt2.31□□□□□ -2.04
YPL216WQ08964 CDC53YDL132W 2448 nt2.3□□□□□ -2.04
YPL216WQ08964 NOP14YDL148C 2433 nt2.3□□□□□ -2.04
YPL216WQ08964 KAP123YER110C 3342 nt2.3□□□□□ -2.04
YPL216WQ08964 MRP10YDL045W-A 288 nt2.3□□□□□ -2.04
YPL216WQ08964 YPR063CYPR063C 423 nt2.3□□□□□ -2.04
YPL216WQ08964 YNL018CYNL018C 1839 nt2.3□□□□□ -2.04
YPL216WQ08964 RRP6YOR001W 2202 nt2.3□□□□□ -2.04
YPL216WQ08964 MMS22YLR320W 4365 nt2.29□□□□□ -2.04
YPL216WQ08964 SWA2YDR320C 2007 nt2.29□□□□□ -2.04
YPL216WQ08964 HDA3YPR179C 1968 nt2.29□□□□□ -2.04
YPL216WQ08964 YBR184WYBR184W 1572 nt2.29□□□□□ -2.04
YPL216WQ08964 NOP53YPL146C 1368 nt2.29□□□□□ -2.04
YPL216WQ08964 BRP1YGL007W 378 nt2.29□□□□□ -2.04
YPL216WQ08964 UPS1YLR193C 528 nt2.29□□□□□ -2.04
YPL216WQ08964 YOR008C-AYOR008C-A 225 nt2.29□□□□□ -2.04
YPL216WQ08964 IRR1YIL026C 3453 nt2.29□□□□□ -2.04
YPL216WQ08964 CRM1YGR218W 3255 nt2.29□□□□□ -2.04
YPL216WQ08964 MVP1YMR004W 1536 nt2.28□□□□□ -2.04
YPL216WQ08964 YFH1YDL120W 525 nt2.28□□□□□ -2.04
YPL216WQ08964 YHL042WYHL042W 453 nt2.28□□□□□ -2.04
YPL216WQ08964 BLI1YKL061W 342 nt2.28□□□□□ -2.04
YPL216WQ08964 YLR255CYLR255C 354 nt2.28□□□□□ -2.04
YPL216WQ08964 YML007C-AYML007C-A 111 nt2.28□□□□□ -2.04
YPL216WQ08964 YMR141W-AYMR141W-A 225 nt2.28□□□□□ -2.04
YPL216WQ08964 YNL337WYNL337W 255 nt2.28□□□□□ -2.04
YPL216WQ08964 snR49snR49 165 nt2.28□□□□□ -2.04
YPL216WQ08964 VPS34YLR240W 2628 nt2.28□□□□□ -2.04
YPL216WQ08964 SSD1YDR293C 3753 nt2.28□□□□□ -2.05
YPL216WQ08964 PXA2YKL188C 2562 nt2.27□□□□□ -2.05
YPL216WQ08964 YOL098CYOL098C 3114 nt2.27□□□□□ -2.05
YPL216WQ08964 SCH9YHR205W 2475 nt2.27□□□□□ -2.05
YPL216WQ08964 CDC36YDL165W 576 nt2.27□□□□□ -2.05
YPL216WQ08964 YGL041CYGL041C 204 nt2.27□□□□□ -2.05
YPL216WQ08964 YKL165C-AYKL165C-A 234 nt2.27□□□□□ -2.05
YPL216WQ08964 IRA2YOL081W 9240 nt2.27□□□□□ -2.05
YPL216WQ08964 TOF1YNL273W 3717 nt2.27□□□□□ -2.05
YPL216WQ08964 SMY1YKL079W 1971 nt2.27□□□□□ -2.05
YPL216WQ08964 SEC16YPL085W 6588 nt2.26□□□□□ -2.05
YPL216WQ08964 YRB1YDR002W 606 nt2.26□□□□□ -2.05
YPL216WQ08964 SDH2YLL041C 801 nt2.26□□□□□ -2.05
YPL216WQ08964 ABF2YMR072W 552 nt2.26□□□□□ -2.05
YPL216WQ08964 YNL114CYNL114C 372 nt2.26□□□□□ -2.05
YPL216WQ08964 YBL083CYBL083C 426 nt2.26□□□□□ -2.05
YPL216WQ08964 YBR064WYBR064W 429 nt2.26□□□□□ -2.05
YPL216WQ08964 SPP41YDR464W 4308 nt2.26□□□□□ -2.05
YPL216WQ08964 YDR426CYDR426C 378 nt2.25□□□□□ -2.05
YPL216WQ08964 PCC1YKR095W-A 267 nt2.25□□□□□ -2.05
YPL216WQ08964 YOR394C-AYOR394C-A 168 nt2.25□□□□□ -2.05
YPL216WQ08964 VMR1YHL035C 4779 nt2.25□□□□□ -2.05
YPL216WQ08964 BRE1YDL074C 2103 nt2.24□□□□□ -2.05
YPL216WQ08964 HCS1YKL017C 2052 nt2.24□□□□□ -2.05
YPL216WQ08964 EMP24YGL200C 612 nt2.24□□□□□ -2.05
YPL216WQ08964 YLR146W-AYLR146W-A 189 nt2.24□□□□□ -2.05
YPL216WQ08964 YMR046W-AYMR046W-A 129 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 11.2 ms