Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 YDR118W-AYDR118W-A 117 nt1.59□□□□□ -2.15
DDC1Q08949 YDR269CYDR269C 324 nt1.59□□□□□ -2.15
DDC1Q08949 YOL159CYOL159C 516 nt1.59□□□□□ -2.15
DDC1Q08949 CDC31YOR257W 486 nt1.59□□□□□ -2.15
DDC1Q08949 PEP3YLR148W 2757 nt1.59□□□□□ -2.15
DDC1Q08949 SLM1YIL105C 2061 nt1.59□□□□□ -2.16
DDC1Q08949 IRA1YBR140C 9279 nt1.58□□□□□ -2.16
DDC1Q08949 YCR043CYCR043C 384 nt1.58□□□□□ -2.16
DDC1Q08949 SWF1YDR126W 1011 nt1.58□□□□□ -2.16
DDC1Q08949 SDH7YDR511W 402 nt1.58□□□□□ -2.16
DDC1Q08949 QCR7YDR529C 384 nt1.58□□□□□ -2.16
DDC1Q08949 FCF2YLR051C 654 nt1.58□□□□□ -2.16
DDC1Q08949 YLR287CYLR287C 1068 nt1.58□□□□□ -2.16
DDC1Q08949 YOR293C-AYOR293C-A 150 nt1.58□□□□□ -2.16
DDC1Q08949 BRR2YER172C 6492 nt1.58□□□□□ -2.16
DDC1Q08949 DAS1YJL149W 1992 nt1.58□□□□□ -2.16
DDC1Q08949 DCP2YNL118C 2913 nt1.57□□□□□ -2.16
DDC1Q08949 CTF4YPR135W 2784 nt1.57□□□□□ -2.16
DDC1Q08949 CAT8YMR280C 4302 nt1.57□□□□□ -2.16
DDC1Q08949 SPC110YDR356W 2835 nt1.57□□□□□ -2.16
DDC1Q08949 YDR157WYDR157W 402 nt1.57□□□□□ -2.16
DDC1Q08949 YHR138CYHR138C 345 nt1.57□□□□□ -2.16
DDC1Q08949 YIL102CYIL102C 306 nt1.57□□□□□ -2.16
DDC1Q08949 PFD1YJL179W 330 nt1.57□□□□□ -2.16
DDC1Q08949 YMR001C-AYMR001C-A 231 nt1.57□□□□□ -2.16
DDC1Q08949 SMY1YKL079W 1971 nt1.57□□□□□ -2.16
DDC1Q08949 SPO23YBR250W 1572 nt1.56□□□□□ -2.16
DDC1Q08949 ZRG8YER033C 3231 nt1.56□□□□□ -2.16
DDC1Q08949 YCR102W-AYCR102W-A 198 nt1.56□□□□□ -2.16
DDC1Q08949 YER076W-AYER076W-A 348 nt1.56□□□□□ -2.16
DDC1Q08949 HSL1YKL101W 4557 nt1.56□□□□□ -2.16
DDC1Q08949 POL5YEL055C 3069 nt1.55□□□□□ -2.16
DDC1Q08949 TDA9YML081W 3756 nt1.55□□□□□ -2.16
DDC1Q08949 YLR434CYLR434C 384 nt1.55□□□□□ -2.16
DDC1Q08949 YMR230W-AYMR230W-A 189 nt1.55□□□□□ -2.16
DDC1Q08949 YBL071CYBL071C 309 nt1.55□□□□□ -2.16
DDC1Q08949 MRPL50YNR022C 420 nt1.55□□□□□ -2.16
DDC1Q08949 YBR285WYBR285W 435 nt1.55□□□□□ -2.16
DDC1Q08949 YJR039WYJR039W 3366 nt1.55□□□□□ -2.16
DDC1Q08949 DIE2YGR227W 1578 nt1.55□□□□□ -2.16
DDC1Q08949 SEC63YOR254C 1992 nt1.54□□□□□ -2.16
DDC1Q08949 RPS24BYIL069C 408 nt1.54□□□□□ -2.16
DDC1Q08949 YBR184WYBR184W 1572 nt1.54□□□□□ -2.16
DDC1Q08949 SNF5YBR289W 2718 nt1.53□□□□□ -2.16
DDC1Q08949 HMRA1YCR097W 381 nt1.53□□□□□ -2.16
DDC1Q08949 YER088C-AYER088C-A 324 nt1.53□□□□□ -2.16
DDC1Q08949 DOT6YER088C 2013 nt1.53□□□□□ -2.16
DDC1Q08949 HIR3YJR140C 4947 nt1.53□□□□□ -2.16
DDC1Q08949 CHS1YNL192W 3396 nt1.53□□□□□ -2.17
DDC1Q08949 RKM1YPL208W 1752 nt1.52□□□□□ -2.17
DDC1Q08949 RTT102YGR275W 474 nt1.52□□□□□ -2.17
DDC1Q08949 YHL009W-AYHL009W-A 1242 nt1.52□□□□□ -2.17
DDC1Q08949 CGI121YML036W 546 nt1.52□□□□□ -2.17
DDC1Q08949 YPL185WYPL185W 396 nt1.52□□□□□ -2.17
DDC1Q08949 YPR099CYPR099C 357 nt1.52□□□□□ -2.17
DDC1Q08949 YBR174CYBR174C 315 nt1.52□□□□□ -2.17
DDC1Q08949 SEF1YBL066C 3447 nt1.52□□□□□ -2.17
DDC1Q08949 MSH3YCR092C 3057 nt1.52□□□□□ -2.17
DDC1Q08949 TBS1YBR150C 3285 nt1.51□□□□□ -2.17
DDC1Q08949 SEY1YOR165W 2331 nt1.51□□□□□ -2.17
DDC1Q08949 GNT1YOR320C 1476 nt1.51□□□□□ -2.17
DDC1Q08949 YOR019WYOR019W 2193 nt1.51□□□□□ -2.17
DDC1Q08949 YKL183C-AYKL183C-A 213 nt1.51□□□□□ -2.17
DDC1Q08949 YOR053WYOR053W 342 nt1.51□□□□□ -2.17
DDC1Q08949 YGR250CYGR250C 2346 nt1.5□□□□□ -2.17
DDC1Q08949 IRR1YIL026C 3453 nt1.5□□□□□ -2.17
DDC1Q08949 YDL152WYDL152W 366 nt1.5□□□□□ -2.17
DDC1Q08949 WIP1YDR374W-A 270 nt1.5□□□□□ -2.17
DDC1Q08949 YML009C-AYML009C-A 327 nt1.5□□□□□ -2.17
DDC1Q08949 TFC8YPL007C 1767 nt1.49□□□□□ -2.17
DDC1Q08949 MSC6YOR354C 2079 nt1.49□□□□□ -2.17
DDC1Q08949 PAN3YKL025C 2040 nt1.49□□□□□ -2.17
DDC1Q08949 YLR422WYLR422W 5799 nt1.49□□□□□ -2.17
DDC1Q08949 YAL068W-AYAL068W-A 255 nt1.49□□□□□ -2.17
DDC1Q08949 BSC3YLR465C 309 nt1.49□□□□□ -2.17
DDC1Q08949 YPR012WYPR012W 255 nt1.49□□□□□ -2.17
DDC1Q08949 SPO24YPR036W-A 204 nt1.49□□□□□ -2.17
DDC1Q08949 YPR170W-AYPR170W-A 186 nt1.49□□□□□ -2.17
DDC1Q08949 YGR109W-BYGR109W-B 4644 nt1.48□□□□□ -2.17
DDC1Q08949 PAU3YCR104W 375 nt1.48□□□□□ -2.17
DDC1Q08949 YLR334CYLR334C 381 nt1.48□□□□□ -2.17
DDC1Q08949 YBP1YBR216C 2025 nt1.48□□□□□ -2.17
DDC1Q08949 ATG31YDR022C 591 nt1.47□□□□□ -2.17
DDC1Q08949 YGL239CYGL239C 315 nt1.47□□□□□ -2.17
DDC1Q08949 RPL42BYHR141C 321 nt1.47□□□□□ -2.17
DDC1Q08949 YIL066W-AYIL066W-A 444 nt1.47□□□□□ -2.17
DDC1Q08949 RPL42AYNL162W 321 nt1.47□□□□□ -2.17
DDC1Q08949 IRE1YHR079C 3348 nt1.47□□□□□ -2.17
DDC1Q08949 MDM20YOL076W 2391 nt1.47□□□□□ -2.17
DDC1Q08949 CTR9YOL145C 3234 nt1.46□□□□□ -2.18
DDC1Q08949 MSH6YDR097C 3729 nt1.46□□□□□ -2.18
DDC1Q08949 snR56snR56 88 nt1.46□□□□□ -2.18
DDC1Q08949 YDL011CYDL011C 324 nt1.46□□□□□ -2.18
DDC1Q08949 YER137W-AYER137W-A 306 nt1.46□□□□□ -2.18
DDC1Q08949 HCH1YNL281W 462 nt1.46□□□□□ -2.18
DDC1Q08949 RPL32YBL092W 393 nt1.46□□□□□ -2.18
DDC1Q08949 YPL261CYPL261C 309 nt1.46□□□□□ -2.18
DDC1Q08949 NOP53YPL146C 1368 nt1.46□□□□□ -2.18
DDC1Q08949 PMD1YER132C 5262 nt1.46□□□□□ -2.18
DDC1Q08949 PIK1YNL267W 3201 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms