Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 SMD1YGR074W 441 nt1.45□□□□□ -2.18
CLP1Q08685 LSO2YGR169C-A 279 nt1.45□□□□□ -2.18
CLP1Q08685 PLC1YPL268W 2610 nt1.44□□□□□ -2.18
CLP1Q08685 VMR1YHL035C 4779 nt1.44□□□□□ -2.18
CLP1Q08685 YGL069CYGL069C 465 nt1.44□□□□□ -2.18
CLP1Q08685 HUR1YGL168W 333 nt1.44□□□□□ -2.18
CLP1Q08685 CRG1YHR209W 876 nt1.44□□□□□ -2.18
CLP1Q08685 SEC22YLR268W 645 nt1.44□□□□□ -2.18
CLP1Q08685 RRT1YBL048W 312 nt1.44□□□□□ -2.18
CLP1Q08685 YNL324WYNL324W 396 nt1.44□□□□□ -2.18
CLP1Q08685 YOL159CYOL159C 516 nt1.44□□□□□ -2.18
CLP1Q08685 YBR032WYBR032W 303 nt1.44□□□□□ -2.18
CLP1Q08685 IRR1YIL026C 3453 nt1.43□□□□□ -2.18
CLP1Q08685 KAR3YPR141C 2190 nt1.43□□□□□ -2.18
CLP1Q08685 YLR406C-AYLR406C-A 150 nt1.43□□□□□ -2.18
CLP1Q08685 CYB5YNL111C 363 nt1.43□□□□□ -2.18
CLP1Q08685 PRM3YPL192C 402 nt1.43□□□□□ -2.18
CLP1Q08685 SWT1YOR166C 1377 nt1.43□□□□□ -2.18
CLP1Q08685 MSS11YMR164C 2277 nt1.42□□□□□ -2.18
CLP1Q08685 CLU1YMR012W 3834 nt1.42□□□□□ -2.18
CLP1Q08685 MLH3YPL164C 2148 nt1.42□□□□□ -2.18
CLP1Q08685 YIL020C-AYIL020C-A 339 nt1.42□□□□□ -2.18
CLP1Q08685 MCM22YJR135C 720 nt1.42□□□□□ -2.18
CLP1Q08685 YKL202WYKL202W 582 nt1.42□□□□□ -2.18
CLP1Q08685 NST1YNL091W 3723 nt1.42□□□□□ -2.18
CLP1Q08685 YSW1YBR148W 1830 nt1.41□□□□□ -2.18
CLP1Q08685 YDR114CYDR114C 303 nt1.41□□□□□ -2.18
CLP1Q08685 YER135CYER135C 393 nt1.41□□□□□ -2.18
CLP1Q08685 YFL019CYFL019C 354 nt1.41□□□□□ -2.18
CLP1Q08685 STF2YGR008C 255 nt1.41□□□□□ -2.18
CLP1Q08685 YJL015CYJL015C 285 nt1.41□□□□□ -2.18
CLP1Q08685 YKL063CYKL063C 504 nt1.41□□□□□ -2.18
CLP1Q08685 YML003WYML003W 873 nt1.41□□□□□ -2.18
CLP1Q08685 SNC2YOR327C 348 nt1.41□□□□□ -2.18
CLP1Q08685 SPO22YIL073C 2928 nt1.41□□□□□ -2.18
CLP1Q08685 PBY1YBR094W 2262 nt1.41□□□□□ -2.18
CLP1Q08685 CDC36YDL165W 576 nt1.4□□□□□ -2.19
CLP1Q08685 tQ(UUG)E2tQ(UUG)E2 72 nt1.4□□□□□ -2.19
CLP1Q08685 NFU1YKL040C 771 nt1.4□□□□□ -2.19
CLP1Q08685 YOR192C-CYOR192C-C 237 nt1.4□□□□□ -2.19
CLP1Q08685 YPR146CYPR146C 330 nt1.4□□□□□ -2.19
CLP1Q08685 CDC24YAL041W 2565 nt1.4□□□□□ -2.19
CLP1Q08685 MAD1YGL086W 2250 nt1.4□□□□□ -2.19
CLP1Q08685 EST2YLR318W 2655 nt1.39□□□□□ -2.19
CLP1Q08685 ZEO1YOL109W 342 nt1.39□□□□□ -2.19
CLP1Q08685 YOR394C-AYOR394C-A 168 nt1.39□□□□□ -2.19
CLP1Q08685 RAD9YDR217C 3930 nt1.39□□□□□ -2.19
CLP1Q08685 YER121WYER121W 345 nt1.38□□□□□ -2.19
CLP1Q08685 AGA2YGL032C 264 nt1.38□□□□□ -2.19
CLP1Q08685 RPS18BYML026C 441 nt1.38□□□□□ -2.19
CLP1Q08685 HUG1YML058W-A 207 nt1.38□□□□□ -2.19
CLP1Q08685 MON2YNL297C 4911 nt1.38□□□□□ -2.19
CLP1Q08685 SGD1YLR336C 2700 nt1.38□□□□□ -2.19
CLP1Q08685 SPO75YLL005C 2607 nt1.37□□□□□ -2.19
CLP1Q08685 NCA2YPR155C 1851 nt1.37□□□□□ -2.19
CLP1Q08685 NOT5YPR072W 1683 nt1.37□□□□□ -2.19
CLP1Q08685 YBR121C-AYBR121C-A 159 nt1.37□□□□□ -2.19
CLP1Q08685 CTR9YOL145C 3234 nt1.37□□□□□ -2.19
CLP1Q08685 CDC27YBL084C 2277 nt1.37□□□□□ -2.19
CLP1Q08685 RIC1YLR039C 3171 nt1.37□□□□□ -2.19
CLP1Q08685 COG4YPR105C 2586 nt1.36□□□□□ -2.19
CLP1Q08685 UBP3YER151C 2739 nt1.36□□□□□ -2.19
CLP1Q08685 YER023C-AYER023C-A 213 nt1.36□□□□□ -2.19
CLP1Q08685 URM1YIL008W 300 nt1.36□□□□□ -2.19
CLP1Q08685 HSK3YKL138C-A 210 nt1.36□□□□□ -2.19
CLP1Q08685 FCF2YLR051C 654 nt1.36□□□□□ -2.19
CLP1Q08685 ERP4YOR016C 624 nt1.36□□□□□ -2.19
CLP1Q08685 YBR224WYBR224W 516 nt1.36□□□□□ -2.19
CLP1Q08685 GPX2YBR244W 489 nt1.36□□□□□ -2.19
CLP1Q08685 TTI1YKL033W 3117 nt1.36□□□□□ -2.19
CLP1Q08685 tH(GUG)E1tH(GUG)E1 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)E2tH(GUG)E2 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)G1tH(GUG)G1 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)G2tH(GUG)G2 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)HtH(GUG)H 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)KtH(GUG)K 72 nt1.35□□□□□ -2.19
CLP1Q08685 tH(GUG)MtH(GUG)M 72 nt1.35□□□□□ -2.19
CLP1Q08685 YER076W-AYER076W-A 348 nt1.35□□□□□ -2.19
CLP1Q08685 TMA22YJR014W 597 nt1.35□□□□□ -2.19
CLP1Q08685 YLR154W-FYLR154W-F 141 nt1.35□□□□□ -2.19
CLP1Q08685 RRT15YLR162W-A 189 nt1.35□□□□□ -2.19
CLP1Q08685 LEE1YPL054W 906 nt1.35□□□□□ -2.19
CLP1Q08685 MKT1YNL085W 2493 nt1.35□□□□□ -2.19
CLP1Q08685 YAR009CYAR009C 3591 nt1.35□□□□□ -2.19
CLP1Q08685 SEF1YBL066C 3447 nt1.34□□□□□ -2.19
CLP1Q08685 CBS1YDL069C 690 nt1.34□□□□□ -2.19
CLP1Q08685 QCR7YDR529C 384 nt1.34□□□□□ -2.19
CLP1Q08685 YER079WYER079W 633 nt1.34□□□□□ -2.19
CLP1Q08685 IES5YER092W 378 nt1.34□□□□□ -2.19
CLP1Q08685 YLR287CYLR287C 1068 nt1.34□□□□□ -2.19
CLP1Q08685 TRM732YMR259C 4263 nt1.34□□□□□ -2.2
CLP1Q08685 YLR149CYLR149C 2193 nt1.33□□□□□ -2.2
CLP1Q08685 AHC1YOR023C 1701 nt1.33□□□□□ -2.2
CLP1Q08685 SWF1YDR126W 1011 nt1.33□□□□□ -2.2
CLP1Q08685 SDH7YDR511W 402 nt1.33□□□□□ -2.2
CLP1Q08685 YER087C-AYER087C-A 552 nt1.33□□□□□ -2.2
CLP1Q08685 RTT102YGR275W 474 nt1.33□□□□□ -2.2
CLP1Q08685 YMR001C-AYMR001C-A 231 nt1.33□□□□□ -2.2
CLP1Q08685 UBC7YMR022W 498 nt1.33□□□□□ -2.2
CLP1Q08685 YBL083CYBL083C 426 nt1.33□□□□□ -2.2
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms